MLOC_62372 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9977960.7456280.7373990.852109
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)4.983174.34383.678345.30553
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)00.020937100.0306822
CAR15Developing grain, bracts removed (15 DPA)0.01489000.0512184



CDS Structure of MLOC_62372






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62372.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366906NoneNoneNoneNone
MLOC_62372.1CUST_4616_PI427708080AvailableAvailablecontig_46493 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g30310.1 +1 0.0 616 359/523 (69%) 13111.m02933 protein reticuline oxidase-like protein precursor, putative
TAIR PP10 AT1G30700.1 +1 1e-110 346 220/530 (42%) FAD-binding Berberine family protein | chr1:10892623-10894437 FORWARD LENGTH=527