MLOC_62366 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.12196700.217495
LEAShoots from the seedlings (10 cm shoot stage)0.4452390.07717630.2617620.241102
INF1Young developing inflorescences (5mm)0.0814870.1261690.1538460.0905184
INF2Developing inflorescences (1-1.5 cm)0.2744290.09511360.09275730.17274
ROORoots from the seedlings (10 cm shoot stage)00.1777440.1397320.265107
NODDeveloping tillers at six leaf stage, 3rd internode00.026538400.216198
CAR5Developing grain, bracts removed (5 DPA)0.3270480.1121540.1364560.172259
CAR15Developing grain, bracts removed (15 DPA)0.08616180.08950990.1907920.260404



CDS Structure of MLOC_62366






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62366.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_62366.1CUST_8498_PI427708083AvailableAvailablecontig_464906 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g24850.1 +3 6e-22 100 52/144 (36%) 13109.m02367 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10None-----