MLOC_62347 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.953925.803327.205637.25338
LEAShoots from the seedlings (10 cm shoot stage)27.048651.818456.035941.9767
INF1Young developing inflorescences (5mm)11.623214.291213.360113.06
INF2Developing inflorescences (1-1.5 cm)8.009669.065459.1184111.1845
ROORoots from the seedlings (10 cm shoot stage)1.115262.720864.575843.89132
NODDeveloping tillers at six leaf stage, 3rd internode68.638477.454188.8508249.733
CAR5Developing grain, bracts removed (5 DPA)13.060315.006813.507116.3986
CAR15Developing grain, bracts removed (15 DPA)2.43862.932532.851337.64949



CDS Structure of MLOC_62347






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62347.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248812.1NoneNoneNoneNone
MLOC_62347.1CUST_4615_PI427708080AvailableAvailablecontig_46472 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g35900.2 +1 9e-68 215 146/196 (74%) 13102.m03909 protein thioredoxin, putative, expressed
TAIR PP10 AT1G07700.1 +1 1e-56 185 90/115 (78%) Thioredoxin superfamily protein | chr1:2380214-2381127 FORWARD LENGTH=204