- Predicted Gene MLOC_62347
MLOC_62347 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62347_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.95392 | 5.80332 | 7.20563 | 7.25338 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 27.0486 | 51.8184 | 56.0359 | 41.9767 |
INF1 | Young developing inflorescences (5mm) | 11.6232 | 14.2912 | 13.3601 | 13.06 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.00966 | 9.06545 | 9.11841 | 11.1845 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.11526 | 2.72086 | 4.57584 | 3.89132 |
NOD | Developing tillers at six leaf stage, 3rd internode | 68.6384 | 77.4541 | 88.8508 | 249.733 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.0603 | 15.0068 | 13.5071 | 16.3986 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.4386 | 2.93253 | 2.85133 | 7.64949 |
CDS Structure of MLOC_62347
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62347.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g35900.2 |
+1 |
9e-68 |
215 |
146/196 (74%) |
13102.m03909 protein thioredoxin, putative, expressed |
TAIR PP10 |
AT1G07700.1 |
+1 |
1e-56 |
185 |
90/115 (78%) |
Thioredoxin superfamily protein | chr1:2380214-2381127 FORWARD LENGTH=204 |