MLOC_62343 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.87867.788038.60019.56683
LEAShoots from the seedlings (10 cm shoot stage)3.705340.4349471.031021.42495
INF1Young developing inflorescences (5mm)7.7482510.7679.964518.51443
INF2Developing inflorescences (1-1.5 cm)7.338147.326367.840578.46188
ROORoots from the seedlings (10 cm shoot stage)7.39135.908295.177646.74486
NODDeveloping tillers at six leaf stage, 3rd internode0.5047250.657140.7097051.84159
CAR5Developing grain, bracts removed (5 DPA)4.301674.856974.935164.79945
CAR15Developing grain, bracts removed (15 DPA)1.159510.5962310.7446682.10946



CDS Structure of MLOC_62343






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62343.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_62343.1CUST_14412_PI427708080AvailableAvailablecontig_46465 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g42660.1 +2 0.0 612 287/320 (90%) 13102.m04732 protein sphingolipid delta desaturase, putative, expressed
TAIR PP10 AT4G04930.1 +2 0.0 532 246/325 (76%) | Symbols: DES-1-LIKE | fatty acid desaturase family protein | chr4:2509236-2510918 FORWARD LENGTH=332