MLOC_62341 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.518682.753432.209432.06028
LEAShoots from the seedlings (10 cm shoot stage)3.445271.319681.1851.68249
INF1Young developing inflorescences (5mm)7.466589.125997.553666.17804
INF2Developing inflorescences (1-1.5 cm)1.890181.76671.545571.77473
ROORoots from the seedlings (10 cm shoot stage)4.049466.152924.608386.26544
NODDeveloping tillers at six leaf stage, 3rd internode0.5687560.6064390.2722981.74882
CAR5Developing grain, bracts removed (5 DPA)14.971713.449515.651712.7673
CAR15Developing grain, bracts removed (15 DPA)3.421093.229333.569066.84257



CDS Structure of MLOC_62341






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62341.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_62341.1CUST_14411_PI427708080AvailableAvailablecontig_46464 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g34640.1 -2 0.0 1437 823/1100 (75%) 13108.m03624 protein receptor-like protein kinase precursor, putative, expressed
TAIR PP10 AT1G73080.1 -2 0.0 863 542/1106 (49%) | Symbols: PEPR1, ATPEPR1 | PEP1 receptor 1 | chr1:27484513-27488021 FORWARD LENGTH=1123