MLOC_62334 FPKM values

FPKM by Treatment	FPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.

Treatment ID	Treatment Description	Rep 1 FPKM	Rep 2 FPKM	Rep 3 FPKM	Treatment FPKM
EMB	4-day embryos dissected from germinating grains	0	0.000300385	0.115294	0
LEA	Shoots from the seedlings (10 cm shoot stage)	4.14846	8.47416	13.7243	0
INF1	Young developing inflorescences (5mm)	0.824557	1.33166	0.887012	0
INF2	Developing inflorescences (1-1.5 cm)	0.404954	0.144441	0.679474	0
ROO	Roots from the seedlings (10 cm shoot stage)	0.960603	0.560967	0.0476613	0
NOD	Developing tillers at six leaf stage, 3rd internode	1.29213	1.162	2.8739	0
CAR5	Developing grain, bracts removed (5 DPA)	0.510105	0.153692	0.688723	0
CAR15	Developing grain, bracts removed (15 DPA)	0.0952395	0.60736	0.115307	0

CDS Structure of MLOC_62334

Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62334.1

Cluster member	Probe ID	FPKM by replicate	FPKM by treatment	Source Contig
MLOC_62334.1	CUST_14409_PI427708080	Available	None	contig_46453 (Mapped)

Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

Database	Hit	Frame	E-value	Score	% Identity	Description
Rice PP6	LOC_Os02g49470.1	+3	8e-92	282	147/176 (84%)	13102.m05608 protein tic20 protein-related, putative, expressed
TAIR PP10	AT5G55710.1	+3	4e-58	193	100/177 (56%)	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein ycf60 (TAIR:AT2G47840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:22554995-22555624 REVERSE LENGTH=209