MLOC_62333 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3331290.4351490.2534730.388757
LEAShoots from the seedlings (10 cm shoot stage)0.34673000.320417
INF1Young developing inflorescences (5mm)0.7913450.6620040.6356440.626476
INF2Developing inflorescences (1-1.5 cm)0.9342941.030550.7320121.06054
ROORoots from the seedlings (10 cm shoot stage)0.1339370.1875570.08628870.215631
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.441520.4784010.5009010.490183
CAR15Developing grain, bracts removed (15 DPA)0.048743100.141990.214832



CDS Structure of MLOC_62333






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62333.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_62333.1CUST_14408_PI427708080AvailableAvailablecontig_46449 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g03440.1 -3 2e-51 183 136/383 (36%) 13112.m00300 protein OsFBX436 - F-box domain containing protein, expressed
TAIR PP10None-----