MLOC_62332 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.781640.6051680.4299790.602533
LEAShoots from the seedlings (10 cm shoot stage)3.837910.6277281.592221.58199
INF1Young developing inflorescences (5mm)1.184641.268371.030911.07804
INF2Developing inflorescences (1-1.5 cm)0.5678220.9916840.5866010.900028
ROORoots from the seedlings (10 cm shoot stage)1.084820.6840380.7601840.778553
NODDeveloping tillers at six leaf stage, 3rd internode19.970834.45850.15529663.0884
CAR5Developing grain, bracts removed (5 DPA)0.5671450.5795760.5926190.627713
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_62332






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62332.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373982NoneNoneNoneNone
MLOC_62332.1CUST_4613_PI427708080AvailableAvailablecontig_46449 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g13200.1 +1 4e-172 490 239/304 (79%) 13103.m01530 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G06720.1 +1 8e-119 353 177/302 (59%) | Symbols: ATPA2, PA2 | peroxidase 2 | chr5:2077567-2078857 REVERSE LENGTH=335