- Predicted Gene MLOC_62332
MLOC_62332 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.78164 | 0.605168 | 0.429979 | 0.602533 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.83791 | 0.627728 | 1.59222 | 1.58199 |
INF1 | Young developing inflorescences (5mm) | 1.18464 | 1.26837 | 1.03091 | 1.07804 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.567822 | 0.991684 | 0.586601 | 0.900028 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.08482 | 0.684038 | 0.760184 | 0.778553 |
NOD | Developing tillers at six leaf stage, 3rd internode | 19.9708 | 34.4585 | 0.155296 | 63.0884 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.567145 | 0.579576 | 0.592619 | 0.627713 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_62332
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62332.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g13200.1 |
+1 |
4e-172 |
490 |
239/304 (79%) |
13103.m01530 protein peroxidase precursor, putative, expressed |
TAIR PP10 |
AT5G06720.1 |
+1 |
8e-119 |
353 |
177/302 (59%) |
| Symbols: ATPA2, PA2 | peroxidase 2 | chr5:2077567-2078857 REVERSE LENGTH=335 |