MLOC_62331 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9610620.8778940.5106120.847019
LEAShoots from the seedlings (10 cm shoot stage)0.0917302000.0844302
INF1Young developing inflorescences (5mm)0.0229115000.0209047
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)26.59833.22928.846237.3357
NODDeveloping tillers at six leaf stage, 3rd internode0.01963680.0054661500.0207781
CAR5Developing grain, bracts removed (5 DPA)000.05529510.11407
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_62331






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62331.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363077NoneNoneNoneNone
MLOC_62331.1CUST_4612_PI427708080AvailableAvailablecontig_46449 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g13210.1 +2 3e-169 486 247/306 (81%) 13103.m01531 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G19890.1 +2 8e-115 346 180/304 (59%) Peroxidase superfamily protein | chr5:6724372-6725877 REVERSE LENGTH=328