MLOC_62327 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains44.909856.162353.250661.2126
LEAShoots from the seedlings (10 cm shoot stage)48.004814.047414.419723.4774
INF1Young developing inflorescences (5mm)56.879560.990560.502855.9655
INF2Developing inflorescences (1-1.5 cm)76.789484.235978.9085100.663
ROORoots from the seedlings (10 cm shoot stage)17.66239.118535.442852.8224
NODDeveloping tillers at six leaf stage, 3rd internode58.569668.947944.2908253.761
CAR5Developing grain, bracts removed (5 DPA)71.766871.689467.191980.6611
CAR15Developing grain, bracts removed (15 DPA)18.617915.765418.470745.4249



CDS Structure of MLOC_62327






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62327.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375748NoneNoneNoneNone
MLOC_62327.1CUST_4611_PI427708080AvailableAvailablecontig_46440 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g44340.1 -1 0.0 826 527/576 (91%) 13112.m04688 protein ATMAP70 protein, putative, expressed
TAIR PP10 AT1G24764.1 -1 0.0 615 413/574 (72%) | Symbols: ATMAP70-2, MAP70-2 | microtubule-associated proteins 70-2 | chr1:8760001-8763256 REVERSE LENGTH=634