MLOC_62326 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.371316.718717.577417.9314
LEAShoots from the seedlings (10 cm shoot stage)15.020810.159213.127811.2838
INF1Young developing inflorescences (5mm)23.401825.169723.455522.2868
INF2Developing inflorescences (1-1.5 cm)18.140321.913820.342424.0506
ROORoots from the seedlings (10 cm shoot stage)23.810421.268521.031427.7155
NODDeveloping tillers at six leaf stage, 3rd internode14.021615.076215.715149.275
CAR5Developing grain, bracts removed (5 DPA)20.243518.995120.136620.8753
CAR15Developing grain, bracts removed (15 DPA)3.743783.70053.585319.30499



CDS Structure of MLOC_62326






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62326.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252329.1NoneNoneNoneNone
MLOC_62326.2CUST_4610_PI427708080AvailableAvailablecontig_46440 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g31470.2 -1 0.0 951 524/606 (86%) 13108.m03265 protein peptidase, trypsin-like serine and cysteine proteases, putative, expressed
TAIR PP10 AT2G35155.1 -1 0.0 693 385/583 (66%) Trypsin family protein | chr2:14819209-14821330 REVERSE LENGTH=579