MLOC_62314 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains75.062389.45987.840688.9425
LEAShoots from the seedlings (10 cm shoot stage)105.81855.071950.36263.7334
INF1Young developing inflorescences (5mm)65.178467.657965.960456.8449
INF2Developing inflorescences (1-1.5 cm)40.583348.123446.235550.538
ROORoots from the seedlings (10 cm shoot stage)46.513867.31357.278982.4589
NODDeveloping tillers at six leaf stage, 3rd internode214.184146.02983.6594507.491
CAR5Developing grain, bracts removed (5 DPA)31.045435.061834.267833.614
CAR15Developing grain, bracts removed (15 DPA)5.446983.639235.8278811.157



CDS Structure of MLOC_62314






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62314.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251143.1NoneNoneNoneNone
MLOC_62314.1CUST_4605_PI427708080AvailableAvailablecontig_46428 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g47330.1 -3 0.0 805 398/422 (94%) 13111.m04692 protein ATP-grasp domain containing protein, expressed
TAIR PP10 AT1G09430.1 -3 0.0 736 362/420 (86%) | Symbols: ACLA-3 | ATP-citrate lyase A-3 | chr1:3042135-3044978 FORWARD LENGTH=424