MLOC_62283 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.545074.803164.672855.25832
LEAShoots from the seedlings (10 cm shoot stage)6.385065.141694.478354.79605
INF1Young developing inflorescences (5mm)9.0943811.618712.40099.99088
INF2Developing inflorescences (1-1.5 cm)17.443713.534813.43217.7095
ROORoots from the seedlings (10 cm shoot stage)5.038035.327365.865897.25577
NODDeveloping tillers at six leaf stage, 3rd internode5.7985112.487515.954143.7226
CAR5Developing grain, bracts removed (5 DPA)5.078185.807945.756586.20971
CAR15Developing grain, bracts removed (15 DPA)2.456362.390722.316786.2039



CDS Structure of MLOC_62283






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62283.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357450NoneNoneNoneNone
MLOC_62283.1CUST_4601_PI427708080AvailableAvailablecontig_46392 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g58390.1 -3 3e-152 448 235/356 (66%) 13103.m06413 protein zinc finger, C3HC4 type domain containing protein, expressed
TAIR PP10 AT2G30580.1 -3 1e-56 199 147/416 (35%) | Symbols: DRIP2 | DREB2A-interacting protein 2 | chr2:13026444-13030363 FORWARD LENGTH=420