MLOC_62281 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.117912.000491.774593.13664
LEAShoots from the seedlings (10 cm shoot stage)2.059272.400982.884182.74771
INF1Young developing inflorescences (5mm)2.020761.864982.042082.23498
INF2Developing inflorescences (1-1.5 cm)2.408921.796881.831763.0347
ROORoots from the seedlings (10 cm shoot stage)4.003843.966054.297078.05556
NODDeveloping tillers at six leaf stage, 3rd internode3.456012.942915.0017513.7553
CAR5Developing grain, bracts removed (5 DPA)4.477495.001544.340936.91157
CAR15Developing grain, bracts removed (15 DPA)7.404387.015535.6425821.9428



CDS Structure of MLOC_62281






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62281.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358336NoneNoneNoneNone
MLOC_62281.1CUST_362_PI427708083AvailableAvailablecontig_46392 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g31160.1 +1 4e-40 150 72/78 (92%) 13102.m03409 protein transcription factor, putative
TAIR PP10 AT2G33550.1 +1 2e-29 117 52/75 (69%) Homeodomain-like superfamily protein | chr2:14210180-14211487 REVERSE LENGTH=314