- Predicted Gene MLOC_62281
MLOC_62281 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62281_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_62281_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.11791 | 2.00049 | 1.77459 | 3.13664 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.05927 | 2.40098 | 2.88418 | 2.74771 |
INF1 | Young developing inflorescences (5mm) | 2.02076 | 1.86498 | 2.04208 | 2.23498 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.40892 | 1.79688 | 1.83176 | 3.0347 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.00384 | 3.96605 | 4.29707 | 8.05556 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.45601 | 2.94291 | 5.00175 | 13.7553 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.47749 | 5.00154 | 4.34093 | 6.91157 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.40438 | 7.01553 | 5.64258 | 21.9428 |
CDS Structure of MLOC_62281
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62281.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g31160.1 |
+1 |
4e-40 |
150 |
72/78 (92%) |
13102.m03409 protein transcription factor, putative |
TAIR PP10 |
AT2G33550.1 |
+1 |
2e-29 |
117 |
52/75 (69%) |
Homeodomain-like superfamily protein | chr2:14210180-14211487 REVERSE LENGTH=314 |