MLOC_62261 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.319425.382124.648920.5419
LEAShoots from the seedlings (10 cm shoot stage)18.05718.188737.116549.1566
INF1Young developing inflorescences (5mm)19.628717.942416.198412.7579
INF2Developing inflorescences (1-1.5 cm)11.042514.134913.708911.8666
ROORoots from the seedlings (10 cm shoot stage)6.4223613.857511.617213.0382
NODDeveloping tillers at six leaf stage, 3rd internode16.991510.64988.1848334.065
CAR5Developing grain, bracts removed (5 DPA)22.985724.524226.146419.4991
CAR15Developing grain, bracts removed (15 DPA)5.414914.708915.768279.59693



CDS Structure of MLOC_62261






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62261.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357538NoneNoneNoneNone
MLOC_62261.1CUST_4598_PI427708080AvailableAvailablecontig_463600 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48370.1 +1 0.0 605 309/389 (79%) 13107.m05173 protein glycosyl transferase, family 8, putative, expressed
TAIR PP10 AT2G38650.2 +1 1e-125 389 211/390 (54%) | Symbols: GAUT7 | galacturonosyltransferase 7 | chr2:16161856-16165523 REVERSE LENGTH=619