MLOC_6226 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.1923 | 10.9549 | 11.859 | 10.7506 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.40232 | 1.11791 | 2.04938 | 1.78213 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0.0094693 | 0.0179532 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.0288838 | 0 | 0.0350739 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_6226
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6226.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g43650.2 |
-2 |
0.0 |
592 |
301/372 (81%) |
13104.m04339 protein L-allo-threonine aldolase, putative, expressed |
| TAIR PP10 |
AT3G04520.1 |
-2 |
2e-154 |
450 |
225/344 (65%) |
| Symbols: THA2 | threonine aldolase 2 | chr3:1217397-1219571 REVERSE LENGTH=355 |
