MLOC_62259 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3607110.4258720.2532470.446759
LEAShoots from the seedlings (10 cm shoot stage)0.6530.2115680.7762020.506652
INF1Young developing inflorescences (5mm)0.4385880.2430260.7804590.492043
INF2Developing inflorescences (1-1.5 cm)1.221160.826361.042671.3314
ROORoots from the seedlings (10 cm shoot stage)1.779434.27681.61074.80234
NODDeveloping tillers at six leaf stage, 3rd internode0.506330.3686051.098811.55603
CAR5Developing grain, bracts removed (5 DPA)0.9989341.371961.238881.47626
CAR15Developing grain, bracts removed (15 DPA)90.668479.493778.2213228.328



CDS Structure of MLOC_62259






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62259.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363993NoneNoneNoneNone
MLOC_62259.1CUST_4597_PI427708080AvailableAvailablecontig_46357 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g49440.2 +3 1e-141 407 203/238 (85%) 13105.m05291 protein DUF1264 domain containing protein, putative, expressed
TAIR PP10 AT1G05510.1 +3 3e-109 323 155/226 (69%) Protein of unknown function (DUF1264) | chr1:1629527-1630690 FORWARD LENGTH=241