- Predicted Gene MLOC_62249
MLOC_62249 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 21.7309 | 22.2573 | 19.9901 | 22.6929 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 17.9369 | 9.87916 | 12.3335 | 11.5889 |
| INF1 | Young developing inflorescences (5mm) | 15.0464 | 15.5323 | 16.3955 | 13.9731 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.7513 | 15.1069 | 13.0055 | 15.8424 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 22.2866 | 24.9602 | 17.5313 | 29.7773 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 23.8361 | 27.1556 | 17.9285 | 87.0924 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 30.6414 | 32.5177 | 33.386 | 32.9576 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.8373 | 7.9267 | 7.51136 | 19.3771 |
CDS Structure of MLOC_62249
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62249.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g42320.1 |
-2 |
0.0 |
915 |
530/625 (85%) |
13103.m04556 protein Sec1 family transport protein, putative, expressed |
| TAIR PP10 |
AT2G17980.1 |
-2 |
0.0 |
676 |
396/621 (64%) |
| Symbols: ATSLY1 | Sec1/munc18-like (SM) proteins superfamily | chr2:7824352-7826404 FORWARD LENGTH=627 |