MLOC_62210 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.292523.390621.462125.2045
LEAShoots from the seedlings (10 cm shoot stage)8.636252.36232.382454.16782
INF1Young developing inflorescences (5mm)49.893248.113838.755343.4173
INF2Developing inflorescences (1-1.5 cm)39.381552.236640.355356.0981
ROORoots from the seedlings (10 cm shoot stage)4.7506911.711610.046515.8681
NODDeveloping tillers at six leaf stage, 3rd internode2.812422.371691.254118.62446
CAR5Developing grain, bracts removed (5 DPA)24.043924.98625.231127.7844
CAR15Developing grain, bracts removed (15 DPA)4.032173.38254.9630110.1373



CDS Structure of MLOC_62210






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62210.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366154NoneNoneNoneNone
MLOC_62210.1CUST_4588_PI427708080AvailableAvailablecontig_46299 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g33030.1 -1 0.0 1048 581/779 (75%) 13105.m03407 protein kinesin motor domain containing protein, putative, expressed
TAIR PP10 AT5G27550.1 -1 0.0 588 330/640 (52%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:9727634-9731323 REVERSE LENGTH=765