MLOC_62206 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4194170.4353740.9001110.483518
LEAShoots from the seedlings (10 cm shoot stage)17.793218.145825.949217.225
INF1Young developing inflorescences (5mm)0.2436320.2707890.2158440.22572
INF2Developing inflorescences (1-1.5 cm)0.0558488000.0235918
ROORoots from the seedlings (10 cm shoot stage)68.257450.678846.017961.2392
NODDeveloping tillers at six leaf stage, 3rd internode110.668156.483260.806431.985
CAR5Developing grain, bracts removed (5 DPA)00.3216380.0670590.148384
CAR15Developing grain, bracts removed (15 DPA)000.05596280.0455883



CDS Structure of MLOC_62206






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62206.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248343.1NoneNoneNoneNone
MLOC_62206.1CUST_6995_PI427708080AvailableAvailablecontig_46294 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g11310.1 +2 6e-77 234 104/127 (82%) 13106.m01224 protein plastocyanin-like domain containing protein, putative, expressed
TAIR PP10 AT2G15780.1 +2 3e-35 129 56/112 (50%) Cupredoxin superfamily protein | chr2:6873666-6874701 REVERSE LENGTH=257