MLOC_6219 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.3533 | 7.99289 | 9.26739 | 9.13167 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.0502007 | 0 | 0.0408488 |
| INF1 | Young developing inflorescences (5mm) | 0.0231614 | 0 | 0 | 0.0215575 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.0321392 | 0 | 0.147146 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.17166 | 6.83622 | 5.61333 | 6.01013 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.59227 | 4.84684 | 3.22365 | 10.9379 |
CDS Structure of MLOC_6219
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6219.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g14900.5 |
+2 |
1e-64 |
220 |
132/345 (38%) |
13111.m01535 protein thiol protease SEN102 precursor, putative, expressed |
| TAIR PP10 |
AT3G48340.1 |
+2 |
1e-60 |
208 |
123/334 (37%) |
Cysteine proteinases superfamily protein | chr3:17897739-17899074 FORWARD LENGTH=361 |
