MLOC_62184 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8441041.57691.800891.24474
LEAShoots from the seedlings (10 cm shoot stage)2.853362.478183.078542.17541
INF1Young developing inflorescences (5mm)5.096935.25827.835744.29498
INF2Developing inflorescences (1-1.5 cm)12.31068.321611.768610.0349
ROORoots from the seedlings (10 cm shoot stage)0.9848841.79381.911011.73665
NODDeveloping tillers at six leaf stage, 3rd internode3.896435.376466.9665815.8425
CAR5Developing grain, bracts removed (5 DPA)4.095643.307973.6443.04195
CAR15Developing grain, bracts removed (15 DPA)2.534692.166612.310524.66282



CDS Structure of MLOC_62184






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62184.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355503NoneNoneNoneNone
MLOC_62184.4CUST_4582_PI427708080AvailableAvailablecontig_46273 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g57160.2 +3 2e-103 322 155/190 (82%) 13104.m11967 protein flavonol synthase/flavanone 3-hydroxylase, putative, expressed
TAIR PP10 AT5G07480.1 +3 3e-56 182 90/193 (47%) | Symbols: KUOX1 | KAR-UP oxidoreductase 1 | chr5:2367167-2369554 FORWARD LENGTH=340