- Predicted Gene MLOC_62183
MLOC_62183 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 10.1675 | 13.1173 | 14.1489 | 12.0451 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.43378 | 6.08368 | 7.53807 | 5.85623 |
INF1 | Young developing inflorescences (5mm) | 9.10244 | 9.65241 | 8.96405 | 7.60849 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.91016 | 10.6739 | 7.40558 | 9.24753 |
ROO | Roots from the seedlings (10 cm shoot stage) | 13.2043 | 12.0641 | 9.58962 | 13.7402 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.93614 | 11.534 | 11.9762 | 36.9327 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.9395 | 10.2373 | 9.44626 | 9.59406 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.05425 | 1.64837 | 1.27174 | 2.95652 |
CDS Structure of MLOC_62183
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62183.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g30970.1 |
-3 |
0.0 |
875 |
454/538 (84%) |
13105.m03178 protein copine, putative, expressed |
TAIR PP10 |
AT1G08860.1 |
-3 |
0.0 |
654 |
359/580 (62%) |
| Symbols: BON3 | Calcium-dependent phospholipid-binding Copine family protein | chr1:2842153-2846138 FORWARD LENGTH=584 |