MLOC_6215 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.178218.212916.526515.5559
LEAShoots from the seedlings (10 cm shoot stage)13.25888.134079.162168.31247
INF1Young developing inflorescences (5mm)47.48143.261638.557632.4029
INF2Developing inflorescences (1-1.5 cm)31.51234.816233.641933.4732
ROORoots from the seedlings (10 cm shoot stage)7.8226714.654514.710714.6885
NODDeveloping tillers at six leaf stage, 3rd internode0.4144520.661991.588262.49929
CAR5Developing grain, bracts removed (5 DPA)21.795422.333423.881919.9153
CAR15Developing grain, bracts removed (15 DPA)7.275968.094326.1725914.6494



CDS Structure of MLOC_6215






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366127
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366127CUST_21243_PI427708080NoneNoneNone
MLOC_2358.1NoneAvailableNonecontig_12098 (Mapped)
MLOC_29605.1NoneAvailableNonecontig_2020369 (Not mapped)
MLOC_30035.2NoneAvailableNonecontig_205857 (Not mapped)
MLOC_41711.1NoneAvailableNonecontig_2602501 (Not mapped)
MLOC_41853.1NoneAvailableNonecontig_26098 (Not mapped)
MLOC_52514.1NoneAvailableNonecontig_375805 (Not mapped)
MLOC_53618.1NoneAvailableNonecontig_385155 (Not mapped)
MLOC_6215.1NoneAvailableAvailablecontig_137221 (Mapped)
MLOC_891.1NoneAvailableNonecontig_1073250 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----