- Predicted Gene MLOC_62143
MLOC_62143 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.8834 | 14.5547 | 16.1712 | 13.6912 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 26.6337 | 18.9066 | 18.3571 | 18.2045 |
| INF1 | Young developing inflorescences (5mm) | 14.5667 | 13.4499 | 13.0118 | 11.248 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.1757 | 12.6455 | 11.9288 | 12.381 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.30135 | 4.59127 | 4.66934 | 5.29881 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.33093 | 4.31913 | 9.03978 | 16.827 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.0485 | 10.9323 | 10.7553 | 9.99766 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.28224 | 0.942175 | 1.13951 | 2.54312 |
CDS Structure of MLOC_62143
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62143.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g32590.1 |
-3 |
0.0 |
533 |
261/320 (82%) |
13107.m03302 protein peptidase, M24 family protein, putative, expressed |
| TAIR PP10 |
AT1G13270.1 |
-3 |
7e-136 |
405 |
206/346 (60%) |
| Symbols: MAP1C, MAP1B | methionine aminopeptidase 1B | chr1:4544999-4547155 FORWARD LENGTH=369 |
