MLOC_62137 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.517621.52220.281621.2763
LEAShoots from the seedlings (10 cm shoot stage)12.65923.606373.800665.77851
INF1Young developing inflorescences (5mm)31.792935.87732.786628.7744
INF2Developing inflorescences (1-1.5 cm)27.20232.560126.153332.7508
ROORoots from the seedlings (10 cm shoot stage)8.3734814.188412.908115.4537
NODDeveloping tillers at six leaf stage, 3rd internode8.926069.558288.9084830.7167
CAR5Developing grain, bracts removed (5 DPA)16.054915.745815.783915.867
CAR15Developing grain, bracts removed (15 DPA)1.11110.7276841.505952.60591



CDS Structure of MLOC_62137






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62137.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_62137.1CUST_14381_PI427708080AvailableAvailablecontig_46232 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g42110.1 -3 0.0 907 452/458 (99%) 13110.m03951 protein protein kinase family protein, putative, expressed
TAIR PP10 AT5G46570.1 -3 0.0 780 376/451 (83%) | Symbols: BSK2 | BR-signaling kinase 2 | chr5:18894687-18897198 FORWARD LENGTH=489