- Predicted Gene MLOC_62116
MLOC_62116 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 23.6706 | 31.811 | 30.5236 | 23.9869 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 29.4765 | 29.8554 | 29.6648 | 21.9819 |
| INF1 | Young developing inflorescences (5mm) | 49.908 | 48.8339 | 49.6713 | 34.4382 |
| INF2 | Developing inflorescences (1-1.5 cm) | 49.0726 | 43.2385 | 48.1101 | 41.5739 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 31.9033 | 36.9441 | 36.5317 | 36.6944 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 19.0891 | 16.7279 | 19.9458 | 51.9881 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 31.9906 | 32.5774 | 34.6604 | 25.3826 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.7277 | 11.6352 | 11.5988 | 21.3652 |
CDS Structure of MLOC_62116
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62116.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g48960.4 |
-3 |
2e-113 |
358 |
164/184 (89%) |
13105.m10413 protein splicing factor U2AF, putative, expressed |
| TAIR PP10 |
AT1G27650.1 |
-3 |
2e-109 |
347 |
158/184 (86%) |
| Symbols: ATU2AF35A | U2 snRNP auxiliary factor small subunit, putative | chr1:9615152-9616042 FORWARD LENGTH=296 |