- Predicted Gene MLOC_62101
MLOC_62101 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62101_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 10.8954 | 6.41212 | 5.62768 | 6.91393 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 24.5403 | 1.84795 | 3.6277 | 8.2736 |
INF1 | Young developing inflorescences (5mm) | 51.5207 | 61.4336 | 54.033 | 47.104 |
INF2 | Developing inflorescences (1-1.5 cm) | 43.5198 | 40.1765 | 44.7359 | 45.1046 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.69433 | 8.32063 | 12.1257 | 8.37498 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.3159 | 0.804271 | 0.0951546 | 1.64261 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.7165 | 16.6771 | 16.5281 | 14.9398 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.15174 | 0.353927 | 0.898345 | 1.89559 |
CDS Structure of MLOC_62101
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62101.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g39110.1 |
+2 |
5e-33 |
121 |
48/69 (70%) |
13104.m03776 protein GASR4 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed |
TAIR PP10 |
AT5G14920.1 |
+2 |
2e-19 |
87 |
34/61 (56%) |
Gibberellin-regulated family protein | chr5:4826598-4827761 FORWARD LENGTH=275 |