- Predicted Gene MLOC_62097
MLOC_62097 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62097_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_62097_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0.15187 | 0.097187 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0.0592028 | 0 | 0 | 0.057629 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0798457 | 0.0149212 | 0.0221992 | 0.0433947 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.41984 | 4.05342 | 4.32623 | 3.94373 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.30242 | 6.6844 | 6.96552 | 14.7432 |
CDS Structure of MLOC_62097
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62097.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g51110.1 |
-3 |
9e-143 |
451 |
315/867 (36%) |
13105.m05498 protein expressed protein |
TAIR PP10 |
AT1G24190.1 |
-3 |
4e-37 |
151 |
123/410 (30%) |
| Symbols: SIN3, ATSIN3, SNL3 | SIN3-like 3 | chr1:8563858-8569927 REVERSE LENGTH=1330 |