MLOC_62095 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains64.059148.551163.718555.5536
LEAShoots from the seedlings (10 cm shoot stage)7.226872.463991.914183.20087
INF1Young developing inflorescences (5mm)0.06980430.02597030.02841810.0373231
INF2Developing inflorescences (1-1.5 cm)0.02262130.02145510.05574660.0439538
ROORoots from the seedlings (10 cm shoot stage)76.797275.181650.126981.6639
NODDeveloping tillers at six leaf stage, 3rd internode0.05845520.07981730.06030490.217544
CAR5Developing grain, bracts removed (5 DPA)00.025861100.0331705
CAR15Developing grain, bracts removed (15 DPA)000.03146590.0546465



CDS Structure of MLOC_62095






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62095.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249787.1NoneNoneNoneNone
MLOC_62095.2CUST_18245_PI427708080AvailableAvailablecontig_46113 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g39990.1 +1 6e-129 389 196/381 (51%) 13111.m03952 protein patatin, putative, expressed
TAIR PP10 AT2G26560.1 +1 3e-127 383 203/378 (54%) | Symbols: PLP2, PLA IIA, PLA2A | phospholipase A 2A | chr2:11293912-11295708 REVERSE LENGTH=407