MLOC_6208 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.758980.4632381.039630.936513
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.2593710.1797790.5289740.359579
ROORoots from the seedlings (10 cm shoot stage)1.228510.2684291.428220.606938
NODDeveloping tillers at six leaf stage, 3rd internode000.02189740.0498449
CAR5Developing grain, bracts removed (5 DPA)0.077667400.07316940.143902
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_6208






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6208.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_6208.1CUST_14370_PI427708080AvailableAvailablecontig_137212 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g47450.1 +1 1e-51 166 78/103 (76%) 13107.m05050 protein flowering promoting factor-like 1, putative, expressed
TAIR PP10 AT5G24860.1 +1 7e-23 91 50/108 (46%) | Symbols: FPF1, ATFPF1 | flowering promoting factor 1 | chr5:8541822-8542154 FORWARD LENGTH=110