MLOC_62062 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.222562.502292.660572.04544
LEAShoots from the seedlings (10 cm shoot stage)5.065931.643221.242762.325
INF1Young developing inflorescences (5mm)21.896329.438124.340219.5283
INF2Developing inflorescences (1-1.5 cm)50.753947.089442.588149.0173
ROORoots from the seedlings (10 cm shoot stage)1.005563.828883.868343.82687
NODDeveloping tillers at six leaf stage, 3rd internode37.453536.9310.6517107.918
CAR5Developing grain, bracts removed (5 DPA)0.4757350.4212030.4674410.40916
CAR15Developing grain, bracts removed (15 DPA)0.2192030.1042840.3222350.420414



CDS Structure of MLOC_62062






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62062.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361535NoneNoneNoneNone
MLOC_62062.2CUST_18244_PI427708080AvailableAvailablecontig_46113 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g14380.1 -3 0.0 607 387/972 (40%) 13111.m01474 protein resistance protein LR10, putative, expressed
TAIR PP10 AT3G50950.1 -3 1e-74 266 227/788 (29%) | Symbols: ZAR1 | HOPZ-ACTIVATED RESISTANCE 1 | chr3:18936127-18938685 FORWARD LENGTH=852