- Predicted Gene MLOC_62056
MLOC_62056 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62056_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_62056_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 73.7803 | 114.067 | 104.227 | 104.308 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 85.4266 | 59.9315 | 54.1278 | 60.0338 |
INF1 | Young developing inflorescences (5mm) | 244.531 | 229.47 | 210.304 | 191.968 |
INF2 | Developing inflorescences (1-1.5 cm) | 226.79 | 196.396 | 198.484 | 228.306 |
ROO | Roots from the seedlings (10 cm shoot stage) | 39.4562 | 80.1416 | 63.5427 | 94.8984 |
NOD | Developing tillers at six leaf stage, 3rd internode | 24.4308 | 22.9442 | 32.3439 | 85.8198 |
CAR5 | Developing grain, bracts removed (5 DPA) | 134.101 | 129.962 | 136.519 | 132.405 |
CAR15 | Developing grain, bracts removed (15 DPA) | 64.3324 | 60.0535 | 58.612 | 138.326 |
CDS Structure of MLOC_62056
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62056.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g03070.1 |
+2 |
0.0 |
1263 |
765/972 (79%) |
13101.m00256 protein transposon protein, putative, unclassified, expressed |
TAIR PP10 |
AT4G11420.1 |
+2 |
0.0 |
1010 |
551/799 (69%) |
| Symbols: EIF3A, ATEIF3A-1, EIF3A-1, ATTIF3A1, TIF3A1 | eukaryotic translation initiation factor 3A | chr4:6947834-6952053 REVERSE LENGTH=987 |