MLOC_62051 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.64188.8920310.410111.9208
LEAShoots from the seedlings (10 cm shoot stage)12.380220.208416.204716.3886
INF1Young developing inflorescences (5mm)0.2696280.3361550.6042380.44126
INF2Developing inflorescences (1-1.5 cm)1.230931.296631.726252.03613
ROORoots from the seedlings (10 cm shoot stage)38.30625.79332.268442.0232
NODDeveloping tillers at six leaf stage, 3rd internode125.154136.047209.755522.351
CAR5Developing grain, bracts removed (5 DPA)22.077923.894726.747333.2876
CAR15Developing grain, bracts removed (15 DPA)9.2493610.76099.7565830.6804



CDS Structure of MLOC_62051






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62051.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251081.1NoneNoneNoneNone
MLOC_62051.5CUST_4565_PI427708080AvailableAvailablecontig_46146 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g22490.1 -3 1e-79 255 177/368 (48%) 13103.m02707 protein heavy metal-associated domain containing protein, expressed
TAIR PP10 AT1G56210.1 -3 8e-18 85 96/350 (27%) Heavy metal transport/detoxification superfamily protein | chr1:21035715-21037019 FORWARD LENGTH=364