- Predicted Gene MLOC_62049
MLOC_62049 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62049_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_62049_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 13.1917 | 19.9925 | 22.2058 | 15.764 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 26.5846 | 22.849 | 25.1594 | 19.1223 |
INF1 | Young developing inflorescences (5mm) | 30.018 | 33.2592 | 37.2813 | 22.8041 |
INF2 | Developing inflorescences (1-1.5 cm) | 37.068 | 38.6742 | 36.974 | 34.6561 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.8266 | 22.8319 | 19.176 | 22.6557 |
NOD | Developing tillers at six leaf stage, 3rd internode | 29.1553 | 35.4823 | 35.1182 | 108.523 |
CAR5 | Developing grain, bracts removed (5 DPA) | 35.2246 | 34.6992 | 37.9689 | 28.295 |
CAR15 | Developing grain, bracts removed (15 DPA) | 45.0687 | 40.8819 | 39.3702 | 78.4485 |
CDS Structure of MLOC_62049
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62049.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g45080.1 |
+1 |
0.0 |
884 |
564/787 (72%) |
13108.m04915 protein expressed protein |
TAIR PP10 |
AT1G15780.1 |
+1 |
2e-143 |
472 |
338/778 (43%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335 |