- Predicted Gene MLOC_62048
MLOC_62048 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 22.9398 | 26.2399 | 26.5396 | 28.107 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 31.0119 | 34.3702 | 51.1941 | 36.1958 |
| INF1 | Young developing inflorescences (5mm) | 42.7344 | 42.3826 | 50.7603 | 39.5795 |
| INF2 | Developing inflorescences (1-1.5 cm) | 66.1483 | 66.1006 | 65.9351 | 75.0315 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 29.8334 | 36.6822 | 31.3755 | 47.2712 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 25.4002 | 30.1058 | 41.6163 | 112.148 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 28.1962 | 27.2008 | 26.9163 | 27.8116 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 13.1832 | 14.2263 | 14.0295 | 32.5342 |
CDS Structure of MLOC_62048
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62048.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g41190.2 |
+2 |
8e-180 |
535 |
360/515 (70%) |
13101.m15047 protein glycine-rich protein, putative, expressed |
| TAIR PP10 |
AT1G80000.2 |
+2 |
1e-45 |
172 |
173/519 (33%) |
CASC3/Barentsz eIF4AIII binding | chr1:30093195-30096742 FORWARD LENGTH=605 |