MLOC_62034 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.156512.296114.124315.1294
LEAShoots from the seedlings (10 cm shoot stage)2.652862.036931.396631.81227
INF1Young developing inflorescences (5mm)1.042220.7790160.9818040.903163
INF2Developing inflorescences (1-1.5 cm)3.124393.759114.032224.63857
ROORoots from the seedlings (10 cm shoot stage)17.801921.210711.771226.9652
NODDeveloping tillers at six leaf stage, 3rd internode26.868721.679928.732772.8253
CAR5Developing grain, bracts removed (5 DPA)193.582182.774171.801208.911
CAR15Developing grain, bracts removed (15 DPA)21.497835.022725.025977.184



CDS Structure of MLOC_62034






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62034.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371932NoneNoneNoneNone
MLOC_62034.2CUST_359_PI427708083AvailableAvailablecontig_46131 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g50490.1 -2 7e-171 399 202/225 (90%) 13103.m05491 protein glutamine synthetase, catalytic domain containing protein, expressed
TAIR PP10 AT5G37600.1 -2 2e-161 371 184/225 (82%) | Symbols: ATGSR1, GLN1;1, GSR 1, ATGLN1;1 | glutamine synthase clone R1 | chr5:14933574-14935656 REVERSE LENGTH=356