- Predicted Gene MLOC_62020
MLOC_62020 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0691337 | 0 | 0 | 0.0909523 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.18801 | 21.1409 | 27.7299 | 16.85 |
| INF1 | Young developing inflorescences (5mm) | 0.0231284 | 0 | 0 | 0.0207376 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.207328 | 0.342987 | 0.400162 | 0.429402 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.345237 | 0.063649 | 0.21702 | 0.256904 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.188445 | 0.208916 | 0.146129 | 0.21264 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.125767 | 0.19824 | 0.0906395 | 0.413231 |
CDS Structure of MLOC_62020
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62020.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g30100.1 |
+3 |
4e-118 |
355 |
223/368 (61%) |
13108.m03115 protein 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed |
| TAIR PP10 |
AT1G06620.1 |
+3 |
2e-104 |
318 |
185/366 (51%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2025618-2027094 FORWARD LENGTH=365 |