MLOC_62018 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.050957.238917.851668.32553
LEAShoots from the seedlings (10 cm shoot stage)5.853394.679222.436513.89249
INF1Young developing inflorescences (5mm)7.868698.041519.90087.75408
INF2Developing inflorescences (1-1.5 cm)9.221311.05639.8128311.9863
ROORoots from the seedlings (10 cm shoot stage)3.270344.433354.691245.7566
NODDeveloping tillers at six leaf stage, 3rd internode4.647124.580525.1811917.1456
CAR5Developing grain, bracts removed (5 DPA)10.554911.015910.183311.2659
CAR15Developing grain, bracts removed (15 DPA)2.519662.063571.864865.51006



CDS Structure of MLOC_62018






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62018.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368000NoneNoneNoneNone
MLOC_62018.1CUST_18243_PI427708080AvailableAvailablecontig_46113 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g70300.1 +2 0.0 860 461/558 (83%) 13101.m07635 protein aspartokinase 3, chloroplast precursor, putative, expressed
TAIR PP10 AT5G13280.1 +2 0.0 728 372/464 (80%) | Symbols: AK-LYS1, AK1, AK | aspartate kinase 1 | chr5:4249516-4252654 FORWARD LENGTH=569