MLOC_61991 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains331.875243.945278.383287.322
LEAShoots from the seedlings (10 cm shoot stage)3.09434.2845510.58075.32131
INF1Young developing inflorescences (5mm)13.649815.407315.357413.4769
INF2Developing inflorescences (1-1.5 cm)8.471728.883957.166949.61235
ROORoots from the seedlings (10 cm shoot stage)38.053226.383123.556333.3343
NODDeveloping tillers at six leaf stage, 3rd internode0.6630080.8274081.426322.97854
CAR5Developing grain, bracts removed (5 DPA)6.2037.806327.262527.36834
CAR15Developing grain, bracts removed (15 DPA)3.791434.237534.2588510.2782



CDS Structure of MLOC_61991






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61991.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363513NoneNoneNoneNone
MLOC_61991.1CUST_4558_PI427708080AvailableAvailablecontig_46080 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g53210.1 +1 0.0 624 321/360 (89%) 13104.m05470 protein hydroxyacid oxidase 1, putative, expressed
TAIR PP10 AT4G18360.1 +1 0.0 572 292/357 (82%) Aldolase-type TIM barrel family protein | chr4:10146141-10148386 REVERSE LENGTH=368