MLOC_61980 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)10.031210.08046.017418.70233
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_61980






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61980.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374222NoneNoneNoneNone
MLOC_61980.1CUST_4555_PI427708080AvailableAvailablecontig_46065 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g46284.1 +3 0.0 1190 604/884 (68%) 13106.m04886 protein glycosyl hydrolase, family 31, putative, expressed
TAIR PP10 AT5G11720.1 +3 0.0 915 472/872 (54%) Glycosyl hydrolases family 31 protein | chr5:3776840-3780025 FORWARD LENGTH=902