MLOC_61965 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.3147.095395.715387.34146
LEAShoots from the seedlings (10 cm shoot stage)7.795276.0625814.53326.85417
INF1Young developing inflorescences (5mm)4.404414.652746.688544.74149
INF2Developing inflorescences (1-1.5 cm)5.47025.015583.976025.76762
ROORoots from the seedlings (10 cm shoot stage)15.20184.276615.517335.69481
NODDeveloping tillers at six leaf stage, 3rd internode8.8640517.324716.769539.7351
CAR5Developing grain, bracts removed (5 DPA)7.515828.986557.249978.29119
CAR15Developing grain, bracts removed (15 DPA)5.021214.928115.6346613.6682



CDS Structure of MLOC_61965






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61965.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367559NoneNoneNoneNone
MLOC_61965.1CUST_4553_PI427708080AvailableAvailablecontig_46054 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g63380.1 -2 7e-99 295 140/179 (78%) 13103.m07024 protein expressed protein
TAIR PP10 AT4G14100.1 -2 1e-60 196 91/151 (60%) transferases, transferring glycosyl groups | chr4:8120749-8122288 FORWARD LENGTH=206