MLOC_61963 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8888971.033220.8197280.862204
LEAShoots from the seedlings (10 cm shoot stage)0.7564330.3841791.248370.609346
INF1Young developing inflorescences (5mm)0.217380.1247980.1968090.15109
INF2Developing inflorescences (1-1.5 cm)0.167271000.209412
ROORoots from the seedlings (10 cm shoot stage)20.721520.312213.18719.188
NODDeveloping tillers at six leaf stage, 3rd internode6.502233.146380.08484465.54109
CAR5Developing grain, bracts removed (5 DPA)5.688378.492859.574057.51695
CAR15Developing grain, bracts removed (15 DPA)3.215124.346432.504558.68993



CDS Structure of MLOC_61963






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61963.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365438NoneNoneNoneNone
MLOC_61963.1CUST_4552_PI427708080AvailableAvailablecontig_46054 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g50160.1 +2 4e-47 158 73/95 (77%) 13103.m05456 protein plastocyanin-like domain containing protein, putative, expressed
TAIR PP10 AT2G02850.1 +2 5e-32 117 53/94 (56%) | Symbols: ARPN | plantacyanin | chr2:826630-827720 REVERSE LENGTH=129