MLOC_61959 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains130.71590.3208100.166113.664
LEAShoots from the seedlings (10 cm shoot stage)209.936272.83247.843215.814
INF1Young developing inflorescences (5mm)24.785833.821233.565828.3782
INF2Developing inflorescences (1-1.5 cm)23.531929.342127.356733.3154
ROORoots from the seedlings (10 cm shoot stage)105.97594.295992.5461129.589
NODDeveloping tillers at six leaf stage, 3rd internode205.304275.941240.504874.111
CAR5Developing grain, bracts removed (5 DPA)35.443234.582526.899637.2468
CAR15Developing grain, bracts removed (15 DPA)3.733223.20082.864938.6397



CDS Structure of MLOC_61959






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61959.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362020NoneNoneNoneNone
MLOC_61959.1CUST_4550_PI427708080AvailableAvailablecontig_46049 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g45070.1 +1 2e-35 134 133/156 (85%) 13104.m04514 protein remorin, putative, expressed
TAIR PP10 AT5G23750.2 +1 1e-18 86 105/153 (69%) Remorin family protein | chr5:8010004-8011453 REVERSE LENGTH=201