MLOC_61948 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.043828800.0923986
LEAShoots from the seedlings (10 cm shoot stage)0.2661450.4870951.297730.556972
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)5.588420.4444240.6292651.15204
NODDeveloping tillers at six leaf stage, 3rd internode00.004251930.006339320.0222995
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.0756316000.216203



CDS Structure of MLOC_61948






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61948.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369820NoneNoneNoneNone
MLOC_61948.1CUST_18241_PI427708080AvailableAvailablecontig_46035 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g42200.1 +3 0.0 955 471/561 (84%) 13111.m04192 protein laccase precursor protein, putative, expressed
TAIR PP10 AT3G09220.1 +3 4e-146 441 241/542 (44%) | Symbols: LAC7 | laccase 7 | chr3:2827434-2830477 REVERSE LENGTH=567