- Predicted Gene MLOC_61940
MLOC_61940 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_61940_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_61940_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.98844 | 2.34567 | 2.19051 | 2.96321 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.66982 | 6.08224 | 6.72932 | 4.82071 |
INF1 | Young developing inflorescences (5mm) | 1.76255 | 2.32899 | 2.27704 | 2.01072 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.97824 | 2.19152 | 1.86873 | 2.51027 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.06183 | 1.69745 | 1.87398 | 2.3796 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.81449 | 3.66706 | 4.70921 | 11.9746 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.84388 | 3.62098 | 4.02331 | 3.93193 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.751809 | 0.844238 | 0.626924 | 2.0688 |
CDS Structure of MLOC_61940
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61940.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g38910.1 |
+1 |
1e-39 |
147 |
71/90 (79%) |
13110.m03544 protein expressed protein |
TAIR PP10 |
AT5G52780.1 |
+1 |
2e-21 |
94 |
46/89 (52%) |
Protein of unknown function (DUF3464) | chr5:21390943-21391449 REVERSE LENGTH=168 |