MLOC_61939 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5141350.2818970.3893560.443417
LEAShoots from the seedlings (10 cm shoot stage)2.022370.8056030.9832161.14361
INF1Young developing inflorescences (5mm)0.08252090.1695850.2956170.207619
INF2Developing inflorescences (1-1.5 cm)0.06745130.063519100.107609
ROORoots from the seedlings (10 cm shoot stage)2.421932.076561.151582.86075
NODDeveloping tillers at six leaf stage, 3rd internode4.3808310.30126.3530131.1314
CAR5Developing grain, bracts removed (5 DPA)0.6669080.7567930.4702650.779255
CAR15Developing grain, bracts removed (15 DPA)0.09707550.02231110.05711340.171417



CDS Structure of MLOC_61939






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61939.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61939.3CUST_8459_PI427708083AvailableAvailablecontig_46024 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g38920.1 +2 2e-179 517 270/302 (89%) 13110.m03545 protein protein kinase domain containing protein, expressed
TAIR PP10 AT1G01540.2 +2 4e-145 427 217/304 (71%) Protein kinase superfamily protein | chr1:195980-198383 FORWARD LENGTH=472