MLOC_61924 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.796677.296857.242837.75219
LEAShoots from the seedlings (10 cm shoot stage)58.928592.255975.466566.1494
INF1Young developing inflorescences (5mm)3.441732.669333.666852.83196
INF2Developing inflorescences (1-1.5 cm)1.164221.860821.611381.85449
ROORoots from the seedlings (10 cm shoot stage)1.331541.221733.123621.82676
NODDeveloping tillers at six leaf stage, 3rd internode21.611625.31335.442795.3857
CAR5Developing grain, bracts removed (5 DPA)15.475116.053316.02316.8527
CAR15Developing grain, bracts removed (15 DPA)2.23872.865741.793335.89204



CDS Structure of MLOC_61924






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61924.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364771NoneNoneNoneNone
MLOC_61924.1CUST_4544_PI427708080AvailableAvailablecontig_46001 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g31490.1 -1 6e-169 485 248/335 (74%) 13109.m03153 protein reductase, putative, expressed
TAIR PP10 AT2G33590.1 -1 7e-100 307 162/313 (52%) NAD(P)-binding Rossmann-fold superfamily protein | chr2:14224622-14226365 FORWARD LENGTH=321