MLOC_61917 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains25.406932.437132.44429.6704
LEAShoots from the seedlings (10 cm shoot stage)20.500827.123336.112124.4181
INF1Young developing inflorescences (5mm)33.32533.742837.556227.4148
INF2Developing inflorescences (1-1.5 cm)38.163237.926535.563239.3119
ROORoots from the seedlings (10 cm shoot stage)25.887530.676426.838936.6148
NODDeveloping tillers at six leaf stage, 3rd internode19.902720.269330.917980.4261
CAR5Developing grain, bracts removed (5 DPA)28.650630.281929.472527.2146
CAR15Developing grain, bracts removed (15 DPA)8.104378.191238.9714917.7115



CDS Structure of MLOC_61917






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61917.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61917.1CUST_14349_PI427708080AvailableAvailablecontig_45995 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g47820.1 +3 0.0 763 392/477 (82%) 13107.m05107 protein acyl-CoA dehydrogenase family member 10, putative, expressed
TAIR PP10 AT3G06810.1 +3 0.0 662 338/456 (74%) | Symbols: IBR3 | acyl-CoA dehydrogenase-related | chr3:2146534-2150654 FORWARD LENGTH=824