MLOC_61904 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.273357.645345.597846.8704
LEAShoots from the seedlings (10 cm shoot stage)23.12713.046542.286518.95224
INF1Young developing inflorescences (5mm)204.324178.216155.183148.861
INF2Developing inflorescences (1-1.5 cm)158.115179.988145.356177.727
ROORoots from the seedlings (10 cm shoot stage)4.9412125.267418.507627.991
NODDeveloping tillers at six leaf stage, 3rd internode0.6987170.853470.6214963.08312
CAR5Developing grain, bracts removed (5 DPA)57.418447.814850.045249.4294
CAR15Developing grain, bracts removed (15 DPA)8.646876.133449.1094416.9115



CDS Structure of MLOC_61904






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61904.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61904.6CUST_14346_PI427708080AvailableAvailablecontig_45976 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g08500.1 +2 0.0 706 358/377 (95%) 13107.m00843 protein C-5 cytosine-specific DNA methylase, putative, expressed
TAIR PP10 AT5G49160.1 +2 0.0 1550 845/1509 (56%) | Symbols: MET1, MET2, METI, DDM2, DMT01, DMT1 | methyltransferase 1 | chr5:19932501-19938186 FORWARD LENGTH=1534